Basic Information
Locus ID:
gene_16565
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 42598955 | 42599562 | - | gene_16565 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.90 | 14,450.15 Da | 3.65 | 88.22 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 31 | 127 | 1.194E-41 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 44 | 121 | 1.0E-25 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 29 | 127 | 2.65E-32 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 29 | 129 | 1.3E-33 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 30 | 129 | 36.858295 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17675.1 | Cupredoxin superfamily protein. Encodes a Plantacyanin/Basic blue family protein | 0 |
| RefSeq | XP_052294230.1 | blue copper protein 1b [Citrus sinensis] | 0 |
| A0A072U307 | Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5PUP9 | Phytocyanin domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_168980 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology