Basic Information
Locus ID:
gene_16390
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 1828067 | 1838501 | - | gene_16390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.58 | 66,212.77 Da | 59.94 | 53.84 | -1.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 442 | 525 | 5.0E-20 | IPR006880 |
| Pfam | PF04438 | HIT zinc finger | 542 | 573 | 3.7E-8 | IPR007529 |
| SMART | SM01406 | PAPA_1_2 | 442 | 527 | 6.0E-27 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 399 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 502 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 474 | 499 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 586 | 607 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 215 | - | - |
| Coils | Coil | Coil | 431 | 473 | - | - |
| Coils | Coil | Coil | 481 | 501 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47350.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_021768735.1 | uncharacterized protein LOC110733032 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A6P4AC14 | uncharacterized protein LOC107426162 OS=Ziziphus jujuba OX=326968 GN=LOC107426162 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology