Basic Information
Locus ID:
gene_1636
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Short Name:
LYK4
Description:
lysM domain receptor-like kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 67968779 | 67971036 | - | gene_1636 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.50 | 73,768.38 Da | 38.04 | 92.65 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 381 | 641 | 1.2E-35 | IPR000719 |
| Pfam | PF01476 | LysM domain | 125 | 170 | 0.17 | IPR018392 |
| Pfam | PF01476 | LysM domain | 191 | 235 | 0.0039 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 358 | 644 | 1.64E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 438 | 659 | 5.3E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 332 | 436 | 1.1E-16 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 119 | 182 | 2.0E-5 | IPR036779 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 648 | 30.336523 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 123 | 169 | 9.363409 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 189 | 234 | 9.356401 | IPR018392 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 484 | 496 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 259 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_048501773.1 | lysM domain receptor-like kinase 4 [Beta vulgaris subsp. vulgaris] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9F754 | LysM domain receptor-like kinase 4 OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology