Basic Information
Locus ID:
gene_16315
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 46592116 | 46594003 | + | gene_16315 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.31 | 22,586.72 Da | 49.83 | 76.12 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 169 | 205 | 5.48884E-18 | - |
| Pfam | PF01849 | NAC domain | 64 | 119 | 3.6E-22 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 167 | 205 | 5.4E-12 | IPR044034 |
| Gene3D | G3DSA:1.10.8.10 | - | 167 | 204 | 2.0E-19 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 70 | 123 | 2.3E-31 | IPR038187 |
| SMART | SM01407 | NAC_2 | 64 | 120 | 4.1E-25 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 61 | 126 | 17.528908 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 71 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49470.1 | nascent polypeptide-associated complex subunit alpha-like protein 2. | 0 |
| RefSeq | XP_008808269.1 | nascent polypeptide-associated complex subunit alpha-like protein 4 [Phoenix dactylifera] | 0 |
| Q94JX9 | Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At3g49470 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B7CX50 | nascent polypeptide-associated complex subunit alpha-like protein 4 OS=Phoenix dactylifera OX=42345 GN=LOC103720377 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology