Basic Information
Locus ID:
gene_16258
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 83980464 | 83995383 | + | gene_16258 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 112,988.61 Da | 36.70 | 80.32 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 40 | 316 | 1.88931E-170 | - |
| Pfam | PF09261 | Alpha mannosidase middle domain | 357 | 448 | 6.3E-19 | IPR015341 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 602 | 808 | 3.2E-49 | IPR011682 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 41 | 352 | 2.8E-91 | IPR000602 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 890 | 996 | 3.1E-11 | IPR041147 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 460 | 999 | 4.55E-139 | IPR011013 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 29 | 354 | 7.56E-109 | IPR011330 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 356 | 449 | 1.24E-25 | IPR028995 |
| Gene3D | G3DSA:2.60.40.1180 | - | 465 | 576 | 3.8E-25 | IPR013780 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 321 | 398 | 2.3E-29 | IPR037094 |
| Gene3D | G3DSA:2.70.98.30 | - | 599 | 856 | 2.9E-92 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 399 | 454 | 4.8E-20 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1360 | - | 881 | 999 | 6.2E-35 | - |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 40 | 320 | 7.9E-119 | IPR027291 |
| SMART | SM00872 | Alpha_mann_mid_2 | 357 | 430 | 9.1E-18 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66150.2 | - | 0 |
| RefSeq | XP_020424986.1 | alpha-mannosidase [Prunus persica] | 0 |
| Q9FKW9 | Probable alpha-mannosidase At5g66150 OS=Arabidopsis thaliana OX=3702 GN=At5g66150 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6J5VHW3 | Alpha-mannosidase OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS45842 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology