Basic Information
Locus ID:
gene_1612
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 43071554 | 43080694 | - | gene_1612 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 105,412.07 Da | 45.45 | 78.68 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13983 | STKc_WNK | 36 | 295 | 1.25643E-160 | - |
| Pfam | PF00069 | Protein kinase domain | 41 | 295 | 5.1E-52 | IPR000719 |
| Pfam | PF13833 | EF-hand domain pair | 861 | 912 | 2.8E-16 | IPR002048 |
| Pfam | PF03226 | Yippee zinc-binding/DNA-binding /Mis18, centromere assembly | 713 | 806 | 4.3E-11 | IPR004910 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 40 | 330 | 2.43E-68 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 828 | 918 | 2.65E-10 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 23 | 119 | 2.6E-32 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 826 | 936 | 4.4E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 121 | 299 | 2.1E-52 | - |
| SMART | SM00220 | serkin_6 | 38 | 295 | 1.7E-64 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 881 | 916 | 10.663839 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 295 | 41.855732 | IPR000719 |
| ProSiteProfiles | PS51792 | Yippee domain profile. | 711 | 808 | 46.237572 | IPR034751 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 162 | 174 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 894 | 906 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 464 | 515 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18750.1 | with no lysine (K) kinase 6. Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. | 0 |
| RefSeq | XP_010694218.1 | probable serine/threonine-protein kinase WNK10 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6EU49 | Probable serine/threonine-protein kinase WNK4 OS=Oryza sativa subsp. japonica OX=39947 GN=WNK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7J0EX69 | Serine/threonine-protein kinase WNK7 OS=Actinidia rufa OX=165716 GN=Acr_07g0003940 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology