Basic Information
Locus ID:
gene_1601
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 57530991 | 57551454 | - | gene_1601 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 192,895.88 Da | 48.26 | 78.62 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1459 | 1722 | 4.67947E-148 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 382 | 654 | 7.22474E-123 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1667 | 1720 | 1.7E-6 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1498 | 1664 | 1.8E-34 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 402 | 651 | 4.2E-33 | IPR002423 |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 403 | 640 | 7.63E-5 | IPR027410 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 34 | 114 | 7.2E-8 | IPR011011 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1443 | 1722 | 4.25E-81 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 448 | 620 | 4.19E-39 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1580 | 1723 | 1.0E-42 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1425 | 1579 | 5.3E-36 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 447 | 620 | 3.2E-50 | IPR027409 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 27 | 120 | 1.7E-5 | IPR013083 |
| SMART | SM00330 | PIPK_2 | 1437 | 1723 | 2.1E-116 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1403 | 1722 | 57.89838 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 37 | 110 | 8.701942 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 268 | - | - |
| Coils | Coil | Coil | 1049 | 1069 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_015882443.2 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Ziziphus jujuba var. spinosa] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A5B6ZQN4 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Davidia involucrata OX=16924 GN=Din_016211 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology