Basic Information
Locus ID:
gene_15957
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
CHY zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 60701321 | 60715703 | + | gene_15957 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 140,305.05 Da | 53.52 | 82.82 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12108 | Hr-like | 56 | 187 | 1.71056E-25 | - |
| CDD | cd16464 | RING-H2_Pirh2 | 1123 | 1165 | 1.6837E-17 | - |
| CDD | cd12108 | Hr-like | 585 | 727 | 3.02159E-18 | - |
| Pfam | PF13639 | Ring finger domain | 1121 | 1164 | 7.2E-8 | IPR001841 |
| Pfam | PF05495 | CHY zinc finger | 993 | 1069 | 2.0E-14 | IPR008913 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 56 | 189 | 7.7E-16 | IPR012312 |
| Pfam | PF14599 | Zinc-ribbon | 1170 | 1227 | 5.5E-21 | IPR039512 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 1060 | 1114 | 4.45E-15 | IPR037275 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1121 | 1176 | 2.26E-8 | - |
| Gene3D | G3DSA:2.20.28.10 | - | 1194 | 1229 | 1.6E-15 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 45 | 205 | 3.7E-23 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 578 | 756 | 3.2E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1116 | 1167 | 1.7E-10 | IPR013083 |
| SMART | SM00184 | ring_2 | 1123 | 1164 | 3.5E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 1123 | 1165 | 11.441815 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 1059 | 1122 | 27.578768 | IPR017921 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 986 | 1056 | 22.439423 | IPR008913 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G74770.1 | zinc ion binding. | 0 |
| RefSeq | XP_002266572.2 | PREDICTED: zinc finger protein BRUTUS-like At1g18910 isoform X1 [Vitis vinifera] | 0 |
| F4HVS0 | Zinc finger protein BRUTUS-like At1g74770 OS=Arabidopsis thaliana OX=3702 GN=At1g74770 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5B7C4M7 | Zinc finger protein BRUTUS-like At1g18910 OS=Davidia involucrata OX=16924 GN=Din_043734 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology