Basic Information
Locus ID:
gene_15817
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Serine threonine-protein kinase-like protein CCR4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 35976341 | 35979948 | + | gene_15817 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 86,106.52 Da | 46.88 | 84.92 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 485 | 768 | 1.90322E-89 | - |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 234 | 256 | 8.0E-7 | - |
| Pfam | PF00069 | Protein kinase domain | 480 | 763 | 4.1E-45 | IPR000719 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 125 | 300 | 3.4E-14 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 461 | 766 | 6.07E-76 | IPR011009 |
| Gene3D | G3DSA:2.130.10.30 | - | 123 | 323 | 3.0E-16 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 449 | 567 | 2.7E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 568 | 773 | 2.2E-53 | - |
| SMART | SM00220 | serkin_6 | 479 | 771 | 7.9E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 479 | 771 | 38.604912 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 614 | 626 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 485 | 507 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 414 | 440 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 407 | 440 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 368 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 366 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_021760401.1 | serine/threonine-protein kinase-like protein CCR4 [Chenopodium quinoa] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4FPI0 | serine/threonine-protein kinase-like protein CCR4 OS=Juglans regia OX=51240 GN=LOC109000945 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology