Basic Information
Locus ID:
gene_15783
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 36259660 | 36268725 | + | gene_15783 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 45,796.56 Da | 27.79 | 90.15 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 62 | 326 | 3.0E-38 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 44 | 330 | 1.8E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 139 | 338 | 4.1E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 32 | 136 | 7.9E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 60 | 337 | 30.039709 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09010.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_048497129.1 | probable disease resistance protein At4g27220 [Beta vulgaris subsp. vulgaris] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R831 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_096280 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 7 | gene_15779, gene_15780, gene_15781, gene_15782, gene_15783 ... |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g058420 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00006392, GOSA_00006398 |