Basic Information
Locus ID:
gene_15782
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 36256270 | 36259191 | + | gene_15782 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 41,276.73 Da | 37.97 | 94.94 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 59 | 314 | 7.0E-37 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 34 | 318 | 2.05E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 17 | 125 | 2.3E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 127 | 331 | 1.1E-55 | - |
| SMART | SM00220 | serkin_6 | 51 | 318 | 2.9E-18 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 51 | 325 | 29.700493 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 172 | 184 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09010.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_048497129.1 | probable disease resistance protein At4g27220 [Beta vulgaris subsp. vulgaris] | 0 |
| C0LGH2 | Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana OX=3702 GN=At1g56130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9R831 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_096280 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 7 | gene_15779, gene_15780, gene_15781, gene_15782, gene_15783 ... |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g058420 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00006392, GOSA_00006398 |