Basic Information
Locus ID:
gene_15743
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
inositol 1,4,5-trisphosphate 5-phosphatase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 35263783 | 35271158 | + | gene_15743 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 126,068.20 Da | 42.41 | 76.25 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 592 | 938 | 5.33081E-111 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 597 | 929 | 1.1E-14 | IPR005135 |
| SUPERFAMILY | SSF56219 | DNase I-like | 569 | 960 | 1.68E-58 | IPR036691 |
| SUPERFAMILY | SSF101908 | Putative isomerase YbhE | 210 | 572 | 4.05E-25 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 170 | 400 | 2.8E-11 | IPR015943 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 574 | 971 | 5.2E-101 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 403 | 573 | 1.9E-5 | IPR015943 |
| SMART | SM00320 | WD40_4 | 448 | 486 | 290.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 488 | 525 | 15.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 270 | 308 | 0.89 | IPR001680 |
| SMART | SM00128 | i5p_5 | 590 | 944 | 1.4E-88 | IPR000300 |
| SMART | SM00320 | WD40_4 | 218 | 259 | 3.0 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1129 | 1147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1117 | 1147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 53 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_010672504.2 | type I inositol polyphosphate 5-phosphatase 12 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803KTV9 | IPPc domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology