HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene_15721
Species & Taxonomic ID: Mesembryanthemum crystallinum & 3544
Genome Assembly: Koichi Toyokura Assembly
Description: F-box protein At3g07870-like
Maps and Mapping Data
Chromosome Start End Strand ID
Super-Scaffold_3_Chr_1 34522281 34524844 + gene_15721
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.68 39,561.16 Da 43.30 109.54 -0.07
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 17 87 1.01E-10 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_025875800.1 putative F-box protein At5g15660 [Oryza sativa Japonica Group] 0
TrEMBL K4CYP4 F-box domain-containing protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 8 gene_10790, gene_15721, gene_16719, gene_16720, gene_16746 ...
gene_1909, gene_23270, gene_23976
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.