Basic Information
Locus ID:
gene_15670
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 32927053 | 32938518 | + | gene_15670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.28 | 61,629.81 Da | 41.04 | 90.76 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 252 | 518 | 1.97195E-106 | - |
| Pfam | PF00069 | Protein kinase domain | 247 | 515 | 1.6E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 230 | 521 | 9.31E-86 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 228 | 321 | 6.0E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 322 | 536 | 7.6E-66 | - |
| SMART | SM00220 | serkin_6 | 246 | 517 | 2.0E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 246 | 523 | 39.495354 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 252 | 274 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 368 | 380 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 217 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 519 | 550 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 520 | 536 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56720.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021851414.1 | probable receptor-like protein kinase At5g18500 [Spinacia oleracea] | 0 |
| Q8LEB6 | Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana OX=3702 GN=At5g18500 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9QK51 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_170170 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology