Basic Information
Locus ID:
gene_15590
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 80441104 | 80445826 | - | gene_15590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.50 | 37,175.82 Da | 46.07 | 66.82 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 59 | 327 | 2.9E-84 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 218 | 319 | 2.55E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 216 | 331 | 5.3E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 219 | 320 | 25.173773 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G22670.2 | indoleacetic acid-induced protein 8. IAA8 (IAA8) gene is auxin inducible. | 0 |
| RefSeq | XP_028074847.1 | auxin-responsive protein IAA9 [Camellia sinensis] | 0 |
| Q38826 | Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1X9QDQ4 | Auxin-responsive protein OS=Camellia sinensis OX=4442 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology