Basic Information
Locus ID:
gene_15514
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 76568421 | 76570999 | - | gene_15514 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 41,412.98 Da | 67.42 | 70.54 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 148 | 191 | 1.28525E-18 | - |
| Pfam | PF13639 | Ring finger domain | 148 | 191 | 4.6E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 148 | 196 | 1.81E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 114 | 196 | 9.3E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 149 | 190 | 1.4E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 149 | 191 | 12.459772 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 267 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G17600.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_028125121.1 | RING-H2 finger protein ATL52-like [Camellia sinensis] | 0 |
| Q7XLY8 | E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6A4KJG7 | RING-type E3 ubiquitin transferase (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_21907 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology