Basic Information
Locus ID:
gene_15448
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 72491706 | 72501826 | - | gene_15448 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 45,270.19 Da | 41.42 | 87.39 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 168 | 393 | 1.8E-28 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 249 | 395 | 2.75E-44 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 228 | 398 | 5.2E-47 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 19 | 396 | 25.926617 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 339 | 357 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_019077310.1 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform X3 [Vitis vinifera] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | F6I3K3 | Ubiquitin carboxyl-terminal hydrolase OS=Vitis vinifera OX=29760 GN=VIT_08s0032g01090 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology