Basic Information
Locus ID:
gene_15442
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 18025592 | 18033756 | + | gene_15442 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.90 | 55,549.71 Da | 35.79 | 70.26 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | von Willebrand factor type A domain | 70 | 229 | 1.1E-19 | IPR002035 |
| SUPERFAMILY | SSF53300 | vWA-like | 67 | 229 | 2.23E-22 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 70 | 235 | 1.5E-23 | IPR036465 |
| SMART | SM00327 | VWA_4 | 68 | 235 | 1.2E-9 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 70 | 240 | 15.166194 | IPR002035 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 507 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 364 | 384 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_028110410.1 | E3 ubiquitin-protein ligase WAV3-like [Camellia sinensis] | 0 |
| TrEMBL | A0A7J7HFK2 | VWFA domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_012691 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology