Basic Information
Locus ID:
gene_15256
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 11827532 | 11844611 | + | gene_15256 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 28,676.30 Da | 48.93 | 77.52 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 176 | 207 | 0.00573878 | IPR018392 |
| CDD | cd00118 | LysM | 112 | 147 | 9.60836E-4 | IPR018392 |
| Pfam | PF01476 | LysM domain | 112 | 148 | 0.051 | IPR018392 |
| Pfam | PF01476 | LysM domain | 180 | 210 | 0.002 | IPR018392 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 174 | 216 | 3.7E-5 | IPR036779 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 175 | 223 | 8.690641 | IPR018392 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_021855435.1 | chitin elicitor receptor kinase 1-like isoform X2 [Spinacia oleracea] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9EHA8 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology