Basic Information
Locus ID:
gene_15183
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 39441788 | 39443623 | - | gene_15183 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 57,487.12 Da | 60.31 | 77.48 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 341 | 386 | 4.8E-9 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 23 | 210 | 7.0E-41 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 338 | 407 | 1.44E-16 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 334 | 404 | 4.7E-15 | IPR036638 |
| SMART | SM00353 | finulus | 343 | 392 | 8.3E-15 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 337 | 386 | 16.056271 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 398 | 417 | - | - |
| Coils | Coil | Coil | 383 | 410 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46760.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. | 0 |
| RefSeq | XP_050203928.1 | transcription factor MYC1 [Mercurialis annua] | 0 |
| Q9FIP9 | Transcription factor MYC3 OS=Arabidopsis thaliana OX=3702 GN=MYC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B6ZPA2 | Putative Basic helix-loop-helix DNA-binding family protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_015843 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology