Basic Information
Locus ID:
gene_15040
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 7597306 | 7598400 | + | gene_15040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.31 | 30,718.13 Da | 43.88 | 80.36 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 53 | 249 | 3.6E-50 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 33 | 249 | 1.75E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 125 | 262 | 1.0E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 27 | 124 | 6.8E-20 | - |
| SMART | SM00220 | serkin_6 | 52 | 275 | 1.8E-48 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 52 | 275 | 37.248051 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 58 | 81 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 167 | 179 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 235 | 257 | 2.5E-9 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 125 | 138 | 2.5E-9 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 161 | 179 | 2.5E-9 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32320.1 | MAP kinase kinase 10. member of MAP Kinase Kinase | 0 |
| RefSeq | XP_030946310.1 | mitogen-activated protein kinase kinase 10 [Quercus lobata] | 0 |
| Q9LQM8 | Mitogen-activated protein kinase kinase 10 OS=Arabidopsis thaliana OX=3702 GN=MKK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J4QE06 | Protein kinase domain-containing protein OS=Castanea mollissima OX=60419 GN=CMV_029655 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology