Basic Information
Locus ID:
gene_15003
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Fizzy-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 98720699 | 98727232 | + | gene_15003 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.17 | 54,251.43 Da | 45.31 | 76.68 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 196 | 472 | 2.44712E-40 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 307 | 342 | 3.1E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 347 | 387 | 0.0034 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 229 | 283 | 2.0E-4 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 436 | 472 | 5.7E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 175 | 480 | 1.1E-62 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 168 | 477 | 7.8E-126 | IPR015943 |
| SMART | SM00320 | WD40_4 | 262 | 299 | 0.055 | IPR001680 |
| SMART | SM00320 | WD40_4 | 219 | 259 | 0.0016 | IPR001680 |
| SMART | SM00320 | WD40_4 | 390 | 430 | 110.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 433 | 472 | 2.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 303 | 342 | 6.5E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 175 | 216 | 49.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 345 | 387 | 2.5E-4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 310 | 351 | 14.552052 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 227 | 268 | 9.672996 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 440 | 473 | 14.41838 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 310 | 347 | 11.312864 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 440 | 473 | 11.919224 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 459 | 473 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 329 | 343 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_034674369.1 | protein FIZZY-RELATED 2-like [Vitis riparia] | 0 |
| Q9M7I2 | B-type cell cycle switch protein ccs52A OS=Medicago truncatula OX=3880 GN=CCS52A PE=1 SV=1 | 0 | |
| TrEMBL | A0A7J6IAC6 | ANAPC4_WD40 domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_019402 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology