Basic Information
Locus ID:
gene_1487
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 40915113 | 40917307 | - | gene_1487 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 49,994.96 Da | 47.15 | 60.13 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 72 | 125 | 4.1856E-17 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 72 | 133 | 7.3E-18 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 67 | 136 | 7.98E-19 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 69 | 179 | 7.0E-20 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 71 | 128 | 1.8E-17 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 72 | 136 | 15.777862 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 92 | 107 | 1.6E-9 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 74 | 92 | 1.6E-9 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 108 | 128 | 1.6E-9 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 150 | 172 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 150 | 211 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01710.1 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_021743669.1 | uncharacterized protein LOC110709748 [Chenopodium quinoa] | 0 |
| Q17438 | DnaJ homolog subfamily B member 1 OS=Caenorhabditis elegans OX=6239 GN=dnj-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9CGM7 | J domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology