Basic Information
Locus ID:
gene_14840
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 3752800 | 3755832 | + | gene_14840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 56,560.25 Da | 38.98 | 93.60 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 189 | 459 | 1.13685E-97 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 186 | 456 | 5.8E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 164 | 458 | 5.66E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 260 | 464 | 5.0E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 152 | 259 | 1.6E-39 | - |
| SMART | SM00220 | serkin_6 | 183 | 458 | 7.7E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 183 | 472 | 37.431793 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 189 | 211 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 305 | 317 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 506 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11470.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 31. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021743950.1 | cysteine-rich receptor-like protein kinase 10 isoform X2 [Chenopodium quinoa] | 0 |
| Q9LDM5 | Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana OX=3702 GN=CRK31 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803L6H5 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 5 | gene_14840, gene_14842, gene_14844, gene_14845, gene_14847 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah004747 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg8167, Sbi_jg8168, Sbi_jg8169 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg11849, Seu_jg11851 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00001510 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl51604, Sgl51605, Sgl56893 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.5AG0000600 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG17.192 |