Basic Information
Locus ID:
gene_14814
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
S-type anion channel
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 3182485 | 3188284 | + | gene_14814 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 88,357.71 Da | 45.12 | 90.94 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09323 | TDT_SLAC1_like | 420 | 724 | 1.95466E-105 | - |
| CDD | cd08774 | 14-3-3 | 11 | 223 | 5.29468E-76 | - |
| Pfam | PF03595 | Voltage-dependent anion channel | 421 | 725 | 1.5E-44 | IPR004695 |
| Pfam | PF00244 | 14-3-3 protein | 13 | 227 | 1.4E-63 | IPR023410 |
| SUPERFAMILY | SSF48445 | 14-3-3 protein | 6 | 228 | 7.59E-61 | IPR036815 |
| Gene3D | G3DSA:1.50.10.150 | - | 417 | 735 | 2.8E-65 | IPR038665 |
| Gene3D | G3DSA:1.20.190.20 | - | 1 | 239 | 5.6E-72 | IPR036815 |
| SMART | SM00101 | 1433_4 | 7 | 240 | 1.7E-52 | IPR023410 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 200 | 229 | 7.8E-20 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 39 | 68 | 7.8E-20 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 144 | 170 | 7.8E-20 | IPR000308 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 292 | - | - |
Gene Ontology
Biological Process:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12480.1 | C4-dicarboxylate transporter/malic acid transport protein. Encodes a membrane protein with 10 predicted transmembrane helices. SLAC1 is a multispanning membrane protein expressed predominantly in guard cells that plays a role in regulating cellular ion homeostasis and S-type anion currents. SLAC1 is important for normal stomatal closure in response to a variety of signals including elevated CO2, ozone, ABA, darkness, and humidity. SLAC1:GFP localizes to the plasma membrane. | 0 |
| RefSeq | XP_010676623.1 | guard cell S-type anion channel SLAC1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LD83 | Guard cell S-type anion channel SLAC1 OS=Arabidopsis thaliana OX=3702 GN=SLAC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8B8M0 | guard cell S-type anion channel SLAC1 OS=Nelumbo nucifera OX=4432 GN=LOC104611876 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology