Basic Information
Locus ID:
gene_14750
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 2185477 | 2197819 | + | gene_14750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.71 | 17,591.96 Da | 43.58 | 66.50 | -1.04 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A7C9E2P2 | Chromo domain-containing protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg18987, jg18989 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_14750, gene_25783 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah037464 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g208500 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg29553, Sbi_jg41818, Sbi_jg48299 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg15841, Seu_jg27638 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00028477 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl79171, Sgl81626 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000037857, gene:ENSEOMG00000052877 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.9AG0006380, CQ.Regalona.r1.9BG0016040 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30018310 |
| Apiaceae | Apium graveolens | 1 | Ag11G03296 |
| Arecaceae | Cocos nucifera | 2 | COCNU_06G012040, contig69363763G000010 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103717783 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_03.1174.V1.1, AsparagusV1_03.1175.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri14G27109, Ftri7G21753 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G02670.1, AT1G05120.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10006803m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g03980.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB03g001220.2N, BniB06g045550.2N, BniB06g045570.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G2401 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G2476 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno17g00500 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0215s00007.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g18950 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.2082 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00004420 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb5G28281 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.3136, BH03.3321, CH03.3511 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0568870, gene-QOZ80_7BG0600540 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0141740.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_041052 |
| Poaceae | Oryza coarctata | 2 | Oco13G008410, Oco14G008870 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G291200, gene-BS78_03G027200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0304165 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr08G018520, Chr28G007680 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G417600 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC1BG009870, gene_TRIDC2AG030000 ... |
| Poaceae | Triticum aestivum | 4 | TraesCS1B02G074500.2, TraesCS2A02G224300.1 ... |
| Poaceae | Zea mays | 5 | Zm00001eb046950_P001, Zm00001eb092190_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-910 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g6505 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG13.374, evm.TU.LG21.76 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g13000 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.60414.8, evm.TU.Scaffold_9_RagTag.1591 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-20411, nbisL1-mrna-20488 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-8822 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-21352 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000003l.844 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-1214 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-4715 |
| Salicaceae | Populus euphratica | 1 | populus_peu27014 |
| Solanaceae | Lycium barbarum | 5 | gene-LOC132617992, gene-LOC132618790, gene-LOC132618966 ... |
| Solanaceae | Solanum chilense | 8 | SOLCI000188200, SOLCI001125800, SOLCI001356700 ... |
| Solanaceae | Solanum pennellii | 7 | gene-LOC107001711, gene-LOC107006318, gene-LOC107018510 ... |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_13800 |
| Tamaricaceae | Tamarix chinensis | 1 | TC01G2324 |