Basic Information
Locus ID:
gene_14732
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 1857341 | 1868556 | + | gene_14732 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 74,929.08 Da | 40.19 | 75.02 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00018 | AP2 | 49 | 110 | 1.69605E-13 | IPR001471 |
| CDD | cd18316 | BTB_POZ_KCTD-like | 270 | 361 | 2.90674E-19 | - |
| CDD | cd10017 | B3_DNA | 174 | 247 | 1.16505E-9 | IPR003340 |
| Pfam | PF02214 | BTB/POZ domain | 270 | 370 | 2.6E-16 | IPR003131 |
| Pfam | PF00847 | AP2 domain | 49 | 97 | 6.1E-6 | IPR001471 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 403 | 616 | 1.43E-10 | IPR036322 |
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 174 | 248 | 2.09E-9 | IPR015300 |
| SUPERFAMILY | SSF54695 | POZ domain | 268 | 370 | 1.33E-18 | IPR011333 |
| SUPERFAMILY | SSF54171 | DNA-binding domain | 49 | 109 | 1.5E-13 | IPR016177 |
| Gene3D | G3DSA:2.40.330.10 | - | 155 | 259 | 3.5E-16 | IPR015300 |
| Gene3D | G3DSA:2.130.10.10 | - | 393 | 665 | 7.2E-9 | IPR015943 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 260 | 378 | 1.6E-22 | IPR011333 |
| Gene3D | G3DSA:3.30.730.10 | AP2/ERF domain | 49 | 111 | 6.1E-16 | IPR036955 |
| SMART | SM00225 | BTB_4 | 268 | 378 | 4.6E-7 | IPR000210 |
| SMART | SM00380 | rav1_2 | 50 | 114 | 3.3E-18 | IPR001471 |
| ProSiteProfiles | PS51032 | AP2/ERF domain profile. | 50 | 108 | 18.122902 | IPR001471 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 52 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41330.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 0 |
| RefSeq | XP_021845106.1 | BTB/POZ domain-containing protein At5g41330 [Spinacia oleracea] | 0 |
| Q9FN67 | BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9S0E2 | BTB domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_014230 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology