Basic Information
Locus ID:
gene_1472
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 40697773 | 40700209 | - | gene_1472 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.03 | 58,906.36 Da | 48.43 | 93.33 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 55 | 316 | 2.3E-37 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 33 | 317 | 1.48E-65 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 22 | 126 | 1.7E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 127 | 332 | 3.2E-51 | - |
| SMART | SM00220 | serkin_6 | 51 | 317 | 5.8E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 51 | 317 | 32.68277 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 57 | 80 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 169 | 181 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 361 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28390.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010675502.2 | serine/threonine-protein kinase-like protein At3g51990 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SGN7 | Serine/threonine-protein kinase-like protein At1g28390 OS=Arabidopsis thaliana OX=3702 GN=At1g28390 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9EEM2 | Receptor protein serine/threonine kinase (Fragment) OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology