Basic Information
Locus ID:
gene_14671
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 867263 | 872006 | + | gene_14671 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 41,473.78 Da | 41.89 | 87.25 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00018 | SH3 domain | 305 | 349 | 7.8E-10 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 46 | 254 | 4.19E-20 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 300 | 359 | 7.48E-18 | IPR036028 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 43 | 258 | 1.8E-9 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 285 | 365 | 5.6E-17 | - |
| SMART | SM00326 | SH3_2 | 301 | 356 | 1.2E-16 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 298 | 357 | 22.709404 | IPR001452 |
| Coils | Coil | Coil | 182 | 209 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31440.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_021855884.1 | SH3 domain-containing protein 2-like [Spinacia oleracea] | 0 |
| Q9C865 | SH3 domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SH3P1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9CG06 | SH3 domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology