Basic Information
Locus ID:
gene_14497
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_1_Chr_9 | 32857737 | 32866646 | - | gene_14497 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 84,841.86 Da | 48.35 | 83.93 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03031 | GRX_GRX_like | 277 | 399 | 3.73642E-55 | - |
| Pfam | PF00462 | Glutaredoxin | 278 | 345 | 6.5E-10 | IPR002109 |
| Pfam | PF00646 | F-box domain | 474 | 509 | 4.8E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 463 | 511 | 7.33E-12 | IPR036047 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 270 | 364 | 7.23E-20 | IPR036249 |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 272 | 366 | 5.4E-15 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 468 | 514 | 3.4E-9 | - |
| SMART | SM00256 | fbox_2 | 478 | 517 | 6.0E-4 | IPR001810 |
| ProSiteProfiles | PS51354 | Glutaredoxin domain profile. | 266 | 371 | 17.163858 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 472 | 523 | 10.742706 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 229 | 254 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 205 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 254 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 208 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03870.1 | Glutaredoxin family protein. | 0 |
| RefSeq | XP_034932807.1 | uncharacterized protein LOC118063007 [Populus alba] | 0 |
| Q9FVS1 | F-box/kelch-repeat protein At1g57790 OS=Arabidopsis thaliana OX=3702 GN=At1g57790 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803L2V2 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology