Basic Information
Locus ID:
gene_14389
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_1_Chr_9 | 29714289 | 29725585 | - | gene_14389 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.97 | 64,768.01 Da | 45.95 | 66.08 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 58 | 495 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 69 | 208 | 2.5E-21 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 316 | 495 | 5.7E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 64 | 509 | 4.09E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 45 | 151 | 1.9E-40 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 152 | 496 | 5.2E-76 | - |
| SMART | SM00220 | serkin_6 | 69 | 495 | 1.9E-56 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 69 | 495 | 31.636852 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 75 | 98 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 196 | 208 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 501 | 576 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 501 | 515 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 218 | 310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 554 | 569 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 532 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53030.1 | ser/arg-rich protein kinase 4. Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. | 0 |
| RefSeq | XP_021743164.1 | serine/threonine-protein kinase SRPK-like [Chenopodium quinoa] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8Z5C5 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology