Basic Information
Locus ID:
gene_14363
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_1_Chr_9 | 28856028 | 28885147 | - | gene_14363 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.18 | 122,959.15 Da | 48.78 | 81.26 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15539 | PHD1_AIRE | 760 | 800 | 2.73876E-19 | - |
| Pfam | PF16135 | Tify domain binding domain | 694 | 744 | 2.2E-14 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 761 | 801 | 6.5E-9 | IPR019787 |
| Pfam | PF16135 | Tify domain binding domain | 413 | 468 | 6.2E-11 | IPR032308 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 998 | 1089 | 1.72E-5 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 839 | 902 | 5.55E-10 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 755 | 806 | 6.17E-16 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 825 | 914 | 2.5E-13 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 747 | 824 | 3.2E-18 | IPR013083 |
| SMART | SM00249 | PHD_3 | 760 | 801 | 3.4E-13 | IPR001965 |
| SMART | SM00249 | PHD_3 | 848 | 905 | 0.0022 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 758 | 803 | 10.379999 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 761 | 800 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 559 | 629 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36720.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_021774585.1 | uncharacterized protein LOC110738482 [Chenopodium quinoa] | 0 |
| Q6PDQ2 | Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9EA64 | PHD-type domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology