Basic Information
Locus ID:
gene_14297
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_1_Chr_9 | 25569759 | 25574007 | - | gene_14297 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 69,795.60 Da | 43.08 | 82.79 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 25 | 114 | 2.2E-7 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 210 | 481 | 1.2E-91 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 19 | 115 | 1.96E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 10 | 117 | 1.3E-11 | IPR011333 |
| SMART | SM00225 | BTB_4 | 28 | 134 | 3.5E-4 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 210 | 505 | 92.138481 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 98 | 11.316099 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 624 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 610 | 624 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 284 | - | - |
| Coils | Coil | Coil | 548 | 568 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_021770684.1 | BTB/POZ domain-containing protein At5g03250-like [Chenopodium quinoa] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LSD0 | BTB/POZ domain-containing protein At5g03250-like OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology