Basic Information
Locus ID:
gene_1424
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 21559123 | 21568330 | - | gene_1424 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 98,962.47 Da | 49.32 | 82.40 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 809 | 850 | 5.88075E-23 | - |
| CDD | cd01989 | STK_N | 42 | 196 | 3.50617E-46 | - |
| Pfam | PF04564 | U-box domain | 805 | 876 | 1.5E-19 | IPR003613 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 521 | 775 | 2.9E-38 | IPR001245 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 58 | 164 | 1.84E-5 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 797 | 876 | 5.83E-25 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 496 | 776 | 2.43E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 495 | 588 | 4.9E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 589 | 789 | 3.0E-46 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 41 | 190 | 3.8E-6 | IPR014729 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 803 | 877 | 7.1E-29 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 808 | 871 | 5.6E-28 | IPR003613 |
| SMART | SM00220 | serkin_6 | 516 | 786 | 1.3E-29 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 804 | 878 | 38.259418 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 516 | 787 | 33.771088 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 522 | 543 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 635 | 647 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 356 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 280 | - | - |
| Coils | Coil | Coil | 341 | 365 | - | - |
| Coils | Coil | Coil | 383 | 417 | - | - |
| Coils | Coil | Coil | 432 | 487 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_024024018.1 | U-box domain-containing protein 33 [Morus notabilis] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8K0GX57 | RING-type E3 ubiquitin transferase OS=Rhamnella rubrinervis OX=2594499 GN=FNV43_RR15420 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology