Basic Information
Locus ID:
gene_14197
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 12354261 | 12358476 | + | gene_14197 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 70,606.80 Da | 44.79 | 95.03 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 212 | 480 | 4.8E-91 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 25 | 115 | 3.5E-6 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 14 | 130 | 2.83E-18 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 14 | 141 | 1.6E-11 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 212 | 504 | 89.944138 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 98 | 10.985188 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 596 | 630 | - | - |
| Coils | Coil | Coil | 550 | 577 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_038710729.1 | BTB/POZ domain-containing protein At5g03250-like [Tripterygium wilfordii] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6J5WMP7 | NPH3 domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS16673 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology