HalophFGD

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Basic Information
Locus ID: gene_14179
Species & Taxonomic ID: Mesembryanthemum crystallinum & 3544
Genome Assembly: Koichi Toyokura Assembly
Description: Protein FAR1-RELATED SEQUENCE
Maps and Mapping Data
Chromosome Start End Strand ID
Super-Scaffold_1_Chr_9 19314507 19317972 - gene_14179
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.93 47,948.04 Da 29.22 70.65 -0.54
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03101 FAR1 DNA-binding domain 88 131 1.8E-6 IPR004330
Pfam PF10551 MULE transposase domain 241 335 2.7E-27 IPR018289
KEGG Pathway
KO Term:
K17604 (zinc finger SWIM domain-containing protein 3)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021851331.1 protein FAR1-RELATED SEQUENCE 5-like [Spinacia oleracea] 0
TrEMBL A0A803MWY6 Protein FAR1-RELATED SEQUENCE OS=Chenopodium quinoa OX=63459 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 1 gene_14179
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.2HG0108710.1.CDS1 ...
HORVU.MOREX.r3.2HG0108720.1.CDS1
Poaceae Lolium multiflorum 32 gene-QYE76_000433, gene-QYE76_009952, gene-QYE76_009956 ...
gene-QYE76_015432, gene-QYE76_016022, gene-QYE76_016024, gene-QYE76_022189, gene-QYE76_023297, gene-QYE76_024271, gene-QYE76_025897, gene-QYE76_025941, gene-QYE76_027507, gene-QYE76_030167, gene-QYE76_031348, gene-QYE76_033041, gene-QYE76_035089, gene-QYE76_035161, gene-QYE76_043706, gene-QYE76_046388, gene-QYE76_047861, gene-QYE76_049575, gene-QYE76_049760, gene-QYE76_051277, gene-QYE76_051285, gene-QYE76_053412, gene-QYE76_054901, gene-QYE76_056220, gene-QYE76_059844, gene-QYE76_059847, gene-QYE76_060854, gene-QYE76_060885, gene-QYE76_063176
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.