HalophFGD

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Basic Information
Locus ID: gene_14096
Species & Taxonomic ID: Mesembryanthemum crystallinum & 3544
Genome Assembly: Koichi Toyokura Assembly
Description: F-box domain
Maps and Mapping Data
Chromosome Start End Strand ID
Super-Scaffold_1_Chr_9 14799125 14805171 - gene_14096
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.55 25,004.52 Da 34.65 105.13 0.15
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 18 47 1.9E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 11 47 1.44E-8 IPR036047
Gene3D G3DSA:1.20.1280.50 - 14 48 5.0E-7 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G63520.1 0
RefSeq XP_016730283.1 F-box/LRR-repeat protein At5g63520 [Gossypium hirsutum] 0
Swiss-Prot Q9FMV0 F-box/LRR-repeat protein At5g63520 OS=Arabidopsis thaliana OX=3702 GN=At5g63520 PE=2 SV=1 0
TrEMBL A0A0D2MMS6 F-box domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_003G119900 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 2 gene_14076, gene_14096
Amaranthaceae Suaeda aralocaspica 1 GOSA_00016870
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