Basic Information
Locus ID:
gene_13781
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Appr-1'-p processing enzyme
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 77708093 | 77713476 | - | gene_13781 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 30,706.45 Da | 32.84 | 84.84 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02908 | Macro_OAADPr_deacetylase | 111 | 280 | 7.91988E-89 | - |
| Pfam | PF01661 | Macro domain | 131 | 248 | 1.7E-38 | IPR002589 |
| SUPERFAMILY | SSF52949 | Macro domain-like | 105 | 278 | 7.06E-54 | IPR043472 |
| Gene3D | G3DSA:3.40.220.10 | Leucine Aminopeptidase, subunit E, domain 1 | 89 | 285 | 2.0E-65 | IPR043472 |
| SMART | SM00506 | YBR022w_8 | 110 | 248 | 2.6E-52 | IPR002589 |
| ProSiteProfiles | PS51154 | Macro domain profile. | 98 | 283 | 27.572411 | IPR002589 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40600.1 | appr-1-p processing enzyme family protein. | 0 |
| RefSeq | XP_011076590.1 | uncharacterized protein LOC105160799 [Sesamum indicum] | 0 |
| Q87JZ5 | Macro domain-containing protein VPA0103 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=VPA0103 PE=4 SV=1 | 0 | |
| TrEMBL | A0A2G9GSD6 | Hismacro and SEC14 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19238 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg14196, jg14197, jg3108, jg6838 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_17085 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah032082 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g042690 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg30145, Sbi_jg32514, Sbi_jg43591 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg18312 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00004070 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl66058, Sgl70374 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000016050, gene:ENSEOMG00000017746 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0002740, CQ.Regalona.r1.2BG0003940 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30177770, pistato.v30251310 |
| Apiaceae | Apium graveolens | 1 | Ag7G00269 |
| Arecaceae | Cocos nucifera | 2 | COCNU_04G012700, COCNU_16G005750 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103702127, gene-LOC103720404 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.548.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri8G03304 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G40600.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10017560m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp4g22920.v2.2, Sp4g22930.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g004750.2N, BniB06g000210.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G0040 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G0043 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno15g06660 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0622s00006.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate08g11410, gene.Thate08g11420 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.1700 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00011627 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb1G02535, Lb1G02547 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.3725, BH01.4076, CH01.4337 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0247420, gene-QOZ80_3BG0280820 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0378540.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_068080 |
| Poaceae | Oryza coarctata | 2 | Oco05G012980, Oco06G013490 |
| Poaceae | Oryza sativa | 3 | LOC_Os03g21830.1, LOC_Os06g34540.1, LOC_Os08g04480.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G362200 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0102644, Pt_Chr0102649 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr03G007810, Chr07G001150, Chr10G008810, Chr12G009840 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G308900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG018600, gene_TRIDC4BG030740 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G135800.1, TraesCS4B02G169200.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb016110_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-1656 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g1252 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG10.61, evm.TU.LG17.55 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc07g12930 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_4_RagTag.884 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-27457, nbisL1-mrna-27458 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-1512 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000008l.565 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00001156 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-14339 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-19360 |
| Salicaceae | Populus euphratica | 1 | populus_peu16374 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132640442 |
| Solanaceae | Solanum chilense | 1 | SOLCI005777100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107020959 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_13781 |
| Tamaricaceae | Tamarix chinensis | 1 | TC09G0563 |
| Zosteraceae | Zostera marina | 1 | Zosma02g05260.v3.1 |