Basic Information
Locus ID:
gene_1376
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 39116036 | 39123892 | - | gene_1376 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.27 | 77,819.32 Da | 39.29 | 85.88 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 368 | 666 | 9.4056E-126 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 337 | 653 | 4.5E-98 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 368 | 676 | 9.84E-71 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 371 | 671 | 3.0E-45 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 151 | - | - |
| Coils | Coil | Coil | 237 | 267 | - | - |
| Coils | Coil | Coil | 299 | 326 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61130.1 | galacturonosyltransferase 1. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_010667722.2 | polygalacturonate 4-alpha-galacturonosyltransferase [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LE59 | Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana OX=3702 GN=GAUT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0J8DWF2 | Hexosyltransferase OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_011580 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology