Basic Information
Locus ID:
gene_13664
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Flavin containing amine oxidoreductase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_1_Chr_9 | 4470108 | 4481296 | - | gene_13664 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 105,674.34 Da | 44.84 | 78.01 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01593 | Flavin containing amine oxidoreductase | 491 | 921 | 2.5E-78 | IPR002937 |
| Pfam | PF13450 | NAD(P)-binding Rossmann-like domain | 61 | 117 | 3.0E-11 | - |
| SUPERFAMILY | SSF54373 | FAD-linked reductases, C-terminal domain | 769 | 877 | 4.97E-27 | - |
| SUPERFAMILY | SSF51905 | FAD/NAD(P)-binding domain | 55 | 501 | 1.59E-61 | IPR036188 |
| SUPERFAMILY | SSF54373 | FAD-linked reductases, C-terminal domain | 342 | 450 | 1.37E-27 | - |
| SUPERFAMILY | SSF51905 | FAD/NAD(P)-binding domain | 488 | 921 | 5.34E-53 | IPR036188 |
| Gene3D | G3DSA:3.90.660.10 | - | 564 | 884 | 3.2E-149 | - |
| Gene3D | G3DSA:3.90.660.10 | - | 138 | 457 | 4.4E-152 | - |
| Gene3D | G3DSA:3.50.50.60 | - | 59 | 494 | 4.4E-152 | IPR036188 |
| Gene3D | G3DSA:3.50.50.60 | - | 495 | 921 | 3.2E-149 | IPR036188 |
| PRINTS | PR00757 | Flavin-containing amine oxidase signature | 482 | 499 | 2.1E-9 | IPR001613 |
| PRINTS | PR00757 | Flavin-containing amine oxidase signature | 451 | 473 | 2.1E-9 | IPR001613 |
| PRINTS | PR00757 | Flavin-containing amine oxidase signature | 58 | 77 | 2.1E-9 | IPR001613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 51 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13700.1 | polyamine oxidase 1. Encodes a protein with polyamine oxidase activity. The mRNA of this gene is only expressed in very low amounts in the organs where it was detected (light-grown plants). | 0 |
| RefSeq | XP_048490069.1 | polyamine oxidase 1 [Beta vulgaris subsp. vulgaris] | 0 |
| O64411 | Polyamine oxidase 1 OS=Zea mays OX=4577 GN=MPAO1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0QQI3 | Amino_oxidase domain-containing protein OS=Oryza rufipogon OX=4529 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg130, jg1597, jg29019 |
| Aizoaceae | Mesembryanthemum crystallinum | 7 | gene_13664, gene_13665, gene_13666, gene_13667, gene_13668 ... |
| Amaranthaceae | Atriplex hortensis | 3 | Ah000626, Ah000627, Ah035698 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_2g029100, BVRB_7g169320 |
| Amaranthaceae | Salicornia bigelovii | 7 | Sbi_jg19617, Sbi_jg19618, Sbi_jg21743, Sbi_jg22078 ... |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg16001, Seu_jg28601, Seu_jg28602 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00008621, GOSA_00014958 |
| Amaranthaceae | Suaeda glauca | 9 | Sgl03316, Sgl03620, Sgl08388, Sgl08740, Sgl25134, Sgl30327 ... |
| Amaranthaceae | Chenopodium album | 9 | gene:ENSEOMG00000005689, gene:ENSEOMG00000017063 ... |
| Amaranthaceae | Chenopodium quinoa | 7 | CQ.Regalona.r1.2AG0017140, CQ.Regalona.r1.2BG0018910 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30230040 |
| Apiaceae | Apium graveolens | 1 | Ag1G00270 |
| Arecaceae | Cocos nucifera | 1 | COCNU_05G004220 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103713355, gene-LOC120108588 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.1060.V1.1 |
| Asteraceae | Flaveria trinervia | 3 | Ftri11G22388, Ftri12G07201, FtriNA16082 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G13700.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10015601m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g30320.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g006460.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G0776 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G0784 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate02g38470, gene.Thate02g38480 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-2657 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.82 |
| Plumbaginaceae | Limonium bicolor | 5 | Lb1G07774, Lb2G13332, Lb2G14041, Lb4G23621, Lb8G36436 |
| Poaceae | Echinochloa crus-galli | 8 | AH01.4671, AH02.4470, BH01.2715, BH01.2717, BH02.4520 ... |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_3AG0237150, gene-QOZ80_3AG0237160 ... |
| Poaceae | Hordeum vulgare | 5 | HORVU.MOREX.r3.4HG0400080.1, HORVU.MOREX.r3.6HG0588230.1 ... |
| Poaceae | Lolium multiflorum | 8 | gene-QYE76_018064, gene-QYE76_031821, gene-QYE76_035017 ... |
| Poaceae | Oryza coarctata | 2 | Oco05G005230, Oco20G003030 |
| Poaceae | Oryza sativa | 3 | LOC_Os03g09810.1, LOC_Os09g20260.1, LOC_Os09g20284.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_01G243300, gene-BS78_01G449800 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0101502, Pt_Chr0202686, Pt_Chr0404446 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr01G026260, Chr01G026270, Chr12G013140, Chr13G017100 ... |
| Poaceae | Thinopyrum elongatum | 6 | Tel4E01G448600, Tel4E01G622900, Tel4E01G623000 ... |
| Poaceae | Triticum dicoccoides | 9 | gene_TRIDC4AG005420, gene_TRIDC4BG046130 ... |
| Poaceae | Triticum aestivum | 11 | TraesCS4A02G039600.1, TraesCS4B02G265900.1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb008280_P001, Zm00001eb008300_P001 ... |
| Poaceae | Zoysia japonica | 6 | nbis-gene-27518, nbis-gene-27522, nbis-gene-27523 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g15938, Zma_g4239 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG02.113, evm.TU.LG02.926, evm.TU.LG09.1044 |
| Posidoniaceae | Posidonia oceanica | 3 | gene.Posoc03g06180, gene.Posoc03g06190, gene.Posoc03g06200 |
| Rhizophoraceae | Bruguiera sexangula | 4 | evm.TU.Scaffold_11_RagTag.1009, evm.TU.Scaffold_4_RagTag.480 ... |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-19415, nbisL1-mrna-28881, nbisL1-mrna-9244 |
| Rhizophoraceae | Ceriops tagal | 5 | nbisL1-mrna-10250, nbisL1-mrna-13779, nbisL1-mrna-515 ... |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-15242, nbisL1-mrna-1852, nbisL1-mrna-6986 |
| Rhizophoraceae | Kandelia candel | 5 | add.evm.TU.utg000010l.38, add.evm.TU.utg000010l.39 ... |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00000165, Maker00002823, Maker00010686 |
| Rhizophoraceae | Rhizophora apiculata | 4 | nbisL1-mrna-14596, nbisL1-mrna-755, nbisL1-mrna-8844 ... |
| Rhizophoraceae | Rhizophora mangle | 5 | nbisL1-mrna-1470, nbisL1-mrna-18790, nbisL1-mrna-20171 ... |
| Salicaceae | Populus euphratica | 4 | populus_peu01889, populus_peu28622, populus_peu30080 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132644760 |
| Solanaceae | Solanum chilense | 1 | SOLCI002047700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107009669 |
| Tamaricaceae | Reaumuria soongarica | 2 | gene_11741, gene_15977 |
| Tamaricaceae | Tamarix chinensis | 1 | TC05G1302 |