Basic Information
Locus ID:
gene_13625
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_1_Chr_9 | 3651100 | 3655625 | - | gene_13625 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.44 | 39,608.13 Da | 47.92 | 85.27 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 32 | 286 | 1.44638E-106 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 29 | 286 | 3.0E-56 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 18 | 316 | 1.48E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 16 | 105 | 8.5E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 107 | 299 | 2.2E-49 | - |
| SMART | SM00220 | serkin_6 | 26 | 290 | 2.1E-62 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 26 | 290 | 42.025341 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 32 | 53 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 146 | 158 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 257 | 279 | 2.0E-9 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 140 | 158 | 2.0E-9 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 214 | 236 | 2.0E-9 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 102 | 115 | 2.0E-9 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 332 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50180.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010678873.2 | serine/threonine-protein kinase STY13 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803MFY3 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology