Basic Information
Locus ID:
gene_13621
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
alfin-like 7
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_1_Chr_9 | 3624921 | 3626963 | - | gene_13621 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 47,597.67 Da | 45.20 | 86.43 | -0.37 |
Protein Domain:
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G26210.1 | alfin-like 4. AL4 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA. | 0 |
| RefSeq | XP_021835394.1 | F-box protein CPR30-like [Spinacia oleracea] | 0 |
| O81488 | PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803MFX8 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_13621, gene_19473 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah000520 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl55128, Sgl60381 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000006337, gene:ENSEOMG00000020306 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.5AG0023690, CQ.Regalona.r1.5BG0025170 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG01.2416 |