Basic Information
Locus ID:
gene_13607
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 67303162 | 67323506 | - | gene_13607 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 114,312.26 Da | 36.69 | 82.19 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 37 | 313 | 0.0 | - |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 38 | 349 | 7.8E-94 | IPR000602 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 895 | 1001 | 1.2E-9 | IPR041147 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 354 | 446 | 3.9E-21 | IPR015341 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 601 | 813 | 1.2E-47 | IPR011682 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 353 | 447 | 2.91E-28 | IPR028995 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 26 | 350 | 1.72E-107 | IPR011330 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 454 | 1005 | 9.1E-141 | IPR011013 |
| Gene3D | G3DSA:2.60.40.1180 | - | 475 | 595 | 1.7E-25 | IPR013780 |
| Gene3D | G3DSA:2.60.40.1360 | - | 881 | 1009 | 1.7E-33 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 318 | 395 | 2.3E-30 | IPR037094 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 396 | 452 | 1.9E-21 | IPR037094 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 37 | 317 | 7.6E-124 | IPR027291 |
| Gene3D | G3DSA:2.70.98.30 | - | 596 | 861 | 6.4E-92 | - |
| SMART | SM00872 | Alpha_mann_mid_2 | 354 | 428 | 2.4E-22 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13980.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_010682967.2 | alpha-mannosidase At3g26720 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8LPJ3 | Probable alpha-mannosidase At5g13980 OS=Arabidopsis thaliana OX=3702 GN=At5g13980 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5B7CBJ8 | Alpha-mannosidase OS=Davidia involucrata OX=16924 GN=Din_047212 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology