Basic Information
Locus ID:
gene_13537
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 62059920 | 62073437 | - | gene_13537 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 108,672.22 Da | 51.96 | 82.39 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 757 | 939 | 2.11166E-54 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 320 | 938 | 1.4E-87 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 43 | 144 | 4.3E-24 | IPR006615 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 317 | 941 | 4.12E-105 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 15 | 144 | 2.62E-28 | IPR035927 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 637 | 947 | 2.5E-55 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 158 | 244 | 3.1E-10 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 8 | 157 | 3.6E-35 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 302 | 511 | 1.2E-66 | - |
| SMART | SM00695 | dusp | 38 | 147 | 1.8E-28 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 19 | 144 | 18.841478 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 319 | 941 | 53.249931 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 883 | 900 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 320 | 335 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_010660239.1 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 9 [Vitis vinifera] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7C8YSW4 | Ubiquitin carboxyl-terminal hydrolase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology