Basic Information
Locus ID:
gene_13529
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Peptidyl-prolyl cis-trans isomerase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_1_Chr_9 | 2055962 | 2066267 | - | gene_13529 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.84 | 77,088.46 Da | 84.45 | 38.38 | -1.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01926 | cyclophilin_ABH_like | 60 | 210 | 3.99455E-99 | - |
| Pfam | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 60 | 209 | 5.0E-48 | IPR002130 |
| SUPERFAMILY | SSF50891 | Cyclophilin-like | 60 | 212 | 2.19E-70 | IPR029000 |
| Gene3D | G3DSA:2.40.100.10 | - | 40 | 213 | 9.7E-77 | IPR029000 |
| ProSiteProfiles | PS50072 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 60 | 211 | 41.471001 | IPR002130 |
| ProSitePatterns | PS00170 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 96 | 113 | - | IPR020892 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 64 | 79 | 8.7E-36 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 172 | 187 | 8.7E-36 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 144 | 159 | 8.7E-36 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 159 | 171 | 8.7E-36 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 101 | 113 | 8.7E-36 | IPR002130 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 490 | 509 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 597 | 635 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 222 | 248 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 657 | 674 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 691 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 559 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 579 | 596 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 473 | 489 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 536 | 558 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 383 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 468 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 338 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63400.1 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein. | 0 |
| RefSeq | XP_010679138.2 | peptidyl-prolyl cis-trans isomerase CYP63 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LY75 | Peptidyl-prolyl cis-trans isomerase CYP63 OS=Arabidopsis thaliana OX=3702 GN=CYP63 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B6ZTJ3 | Putative peptidyl-prolyl cis-trans isomerase CYP63 isoform X1 OS=Davidia involucrata OX=16924 GN=Din_017311 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology