Basic Information
Locus ID:
gene_13413
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 52255583 | 52260841 | - | gene_13413 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 102,730.23 Da | 39.46 | 86.31 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 602 | 875 | 2.07698E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 598 | 872 | 4.9E-48 | IPR001245 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 406 | 442 | 8.9E-8 | IPR025875 |
| Pfam | PF13855 | Leucine rich repeat | 121 | 162 | 2.3E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 75 | 3.7E-6 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 345 | 380 | 7.2E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 318 | 1.62E-45 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 344 | 449 | 3.57E-19 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 573 | 872 | 4.28E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 559 | 673 | 7.5E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 674 | 893 | 9.5E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 340 | 7.3E-72 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 343 | 467 | 2.2E-34 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 149 | 174 | 51.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 297 | 320 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 200 | 223 | 82.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 405 | 428 | 100.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 596 | 876 | 6.5E-43 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 429 | 451 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 125 | 148 | 4.7 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 596 | 876 | 41.304508 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 721 | 733 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 602 | 624 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 917 | 951 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 490 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_009351578.2 | receptor protein kinase TMK1 [Pyrus x bretschneideri] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | S8CHK0 | Protein kinase domain-containing protein OS=Genlisea aurea OX=192259 GN=M569_10735 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology