Basic Information
Locus ID:
gene_13362
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 37946095 | 37951828 | + | gene_13362 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.41 | 50,452.12 Da | 44.19 | 80.56 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 27 | 416 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 39 | 178 | 3.2E-22 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 256 | 416 | 4.1E-22 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 34 | 421 | 6.56E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 92 | 416 | 7.4E-120 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 24 | 123 | 7.4E-120 | - |
| SMART | SM00220 | serkin_6 | 38 | 416 | 1.6E-65 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 416 | 34.025497 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 165 | 177 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 44 | 67 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35500.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021851492.1 | SRSF protein kinase 1-like [Spinacia oleracea] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9CU40 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology