Basic Information
Locus ID:
gene_13333
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 27650107 | 27655170 | - | gene_13333 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 85,895.35 Da | 51.49 | 85.67 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 19 | 160 | 8.13904E-57 | - |
| CDD | cd14066 | STKc_IRAK | 467 | 727 | 4.19718E-86 | - |
| Pfam | PF00069 | Protein kinase domain | 462 | 693 | 2.5E-39 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 20 | 133 | 2.8E-9 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 20 | 134 | 1.84E-9 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 443 | 720 | 5.93E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 413 | 533 | 1.5E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 534 | 739 | 9.1E-47 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 19 | 150 | 5.2E-10 | IPR014729 |
| SMART | SM00220 | serkin_6 | 461 | 721 | 1.0E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 461 | 724 | 34.421249 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 579 | 591 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 218 | - | - |
| Coils | Coil | Coil | 378 | 439 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_038696897.1 | U-box domain-containing protein 35-like [Tripterygium wilfordii] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6J1CTA9 | U-box domain-containing protein 52-like OS=Momordica charantia OX=3673 GN=LOC111014066 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology