Basic Information
Locus ID:
gene_13225
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 35619789 | 35624541 | + | gene_13225 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 81,104.03 Da | 43.04 | 93.44 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 313 | 330 | 0.87 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 425 | 708 | 2.0E-45 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 114 | 173 | 3.3E-11 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 66 | 109 | 6.6E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 16 | 37 | 3.7E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 14 | 357 | 6.8E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 421 | 713 | 6.47E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 409 | 502 | 2.0E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 113 | 176 | 1.4E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 503 | 721 | 3.1E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 8 | 112 | 7.5E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 177 | 366 | 4.8E-40 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 161 | 186 | 55.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 423 | 710 | 8.0E-26 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 114 | 137 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 64 | 88 | 62.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 308 | 331 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 89 | 112 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 235 | 258 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 210 | 234 | 12.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 90 | 112 | 7.280716 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 423 | 718 | 36.216267 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 561 | 573 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 429 | 452 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021739112.1 | receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LBI7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology