Basic Information
Locus ID:
gene_13224
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_12_Chr_6 | 35616496 | 35619014 | + | gene_13224 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 83,075.88 Da | 46.20 | 96.72 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 426 | 709 | 2.33486E-92 | - |
| Pfam | PF13855 | Leucine rich repeat | 111 | 170 | 2.0E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 422 | 706 | 2.6E-45 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 3 | 34 | 3.0E-7 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 87 | 109 | 0.48 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 22 | 340 | 3.23E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 412 | 711 | 5.26E-71 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 111 | 1.8E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 112 | 174 | 1.5E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 175 | 359 | 5.4E-41 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 499 | 734 | 2.3E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 404 | 498 | 6.0E-19 | - |
| SMART | SM00220 | serkin_6 | 420 | 708 | 1.9E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 420 | 716 | 35.891186 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 426 | 450 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 558 | 570 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 718 | 740 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021739112.1 | receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R6L4 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_106860 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology